Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | NCI_ARF1 PATHWAY |
| Enrichment Score (ES) | -0.8283973 |
| Normalized Enrichment Score (NES) | -1.7769018 |
| Nominal p-value | 0.0054151625 |
| FDR q-value | 0.084137164 |
| FWER p-Value | 0.383 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | AP2M1 | 1442227_at 1442429_at 1443338_at 1450894_a_at 1457122_at | 2556 | 0.533 | -0.0820 | No | ||
| 2 | RAC1 | 1423734_at 1437674_at 1451086_s_at | 6772 | 0.190 | -0.2620 | No | ||
| 3 | GOSR2 | 1419371_s_at 1419372_at | 6995 | 0.183 | -0.2603 | No | ||
| 4 | PLD2 | 1417237_at 1457252_x_at | 15290 | -0.091 | -0.6327 | No | ||
| 5 | AP2A1 | 1460724_at | 15591 | -0.104 | -0.6397 | No | ||
| 6 | ARF1 | 1420920_a_at 1426390_a_at | 17035 | -0.210 | -0.6919 | No | ||
| 7 | ARFGAP1 | 1427245_at 1445067_at | 17838 | -0.301 | -0.7089 | No | ||
| 8 | CLTA | 1421062_s_at 1434540_a_at 1444328_at | 18004 | -0.324 | -0.6955 | No | ||
| 9 | GGA3 | 1438008_at | 20919 | -1.279 | -0.7455 | Yes | ||
| 10 | ARFIP2 | 1424240_at 1435498_at | 21063 | -1.431 | -0.6593 | Yes | ||
| 11 | CLTB | 1453063_at 1456797_at 1460740_at | 21311 | -1.736 | -0.5580 | Yes | ||
| 12 | GBF1 | 1415709_s_at 1415757_at 1432677_at 1438207_at | 21611 | -2.381 | -0.4174 | Yes | ||
| 13 | CD4 | 1419696_at 1427779_a_at | 21725 | -2.835 | -0.2388 | Yes | ||
| 14 | COPA | 1415706_at 1437274_at | 21875 | -3.832 | 0.0027 | Yes |
